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The solution ended up being that the source code in the .jlink file needed to contain the entire path to the bin file, not just the bin file name.
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Hello, I have a batch file that calls JLink.exe to set it up and run a command file. .bat file contents Source Code (2 lines) command file contents Source Code (8 lines) When I right click the .bat file located in a folder on my desktop and run it, I have no issue with it running. When I call the .bat file in LabVIEW, I get the following error: J-Link>loadbin Example.bin,0x400000 'loadbin': Performing implicit reset & halt of MCU. Downloading file [Sam4sRecoveryFullImage.bin]... Failed to open f…